RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g38640.1 View Network Show in Genome Browser |
| Other Names | Os12g0575000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23735746-23736790 Nucleotide Length: 573 |
| Protein-coding | LOC_Os12g38640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64960 LOC_Os06g15400 LOC_Os01g41710 LOC_Os03g50310 LOC_Os12g07210 LOC_Os11g07020 LOC_Os12g19470 LOC_Os12g19381 LOC_Os03g22370 LOC_Os02g49880 LOC_Os07g25430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5083 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g38640.1 |
| Rice Genome Annotation | LOC_Os12g38640.1 |
| Ricechip | LOC_Os12g38640.1 |
| KEGG | osa:4352606 dosa:Os12t0575000-01 |
| Entrez-Gene | 4352606 |