RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g38880.1 View Network Show in Genome Browser |
| Other Names | Os12g0578000 |
| Description | tetratricopeptide-like helical, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 23912105-23914774 Nucleotide Length: 1476 |
| Protein-coding | LOC_Os12g38880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g32320 LOC_Os09g32030 LOC_Os09g30100 LOC_Os08g09270 LOC_Os03g22780 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1430 osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g38880.1 |
| Rice Genome Annotation | LOC_Os12g38880.1 |
| Ricechip | LOC_Os12g38880.1 |
| KEGG | dosa:Os12t0578000-01 |