RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g39080.1 View Network Show in Genome Browser |
| Other Names | Os12g0580400 |
| Description | amino acid permease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 24037791-24039281 Nucleotide Length: 1491 |
| Protein-coding | LOC_Os12g39080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g13570 LOC_Os01g37910 LOC_Os01g42234 LOC_Os12g03470 LOC_Os03g37984 LOC_Os01g04350 LOC_Os11g05690 LOC_Os01g58240 LOC_Os01g58270 LOC_Os12g06060 LOC_Os01g71720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g39080.1 |
| Rice Genome Annotation | LOC_Os12g39080.1 |
| Ricechip | LOC_Os12g39080.1 |
| KEGG | osa:4352634 dosa:Os12t0580400-01 |
| Entrez-Gene | 4352634 |