RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g40279.1 View Network Show in Genome Browser |
| Other Names | Os12g0594300,Os12g0594200 |
| Description | protein kinase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 24925191-24943707 Nucleotide Length: 12789 |
| Protein-coding | LOC_Os12g40279 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g33549 LOC_Os06g48300 LOC_Os02g05630 LOC_Os02g55560 LOC_Os02g15594 LOC_Os04g56450 LOC_Os07g32380 LOC_Os04g37904 LOC_Os06g33530 LOC_Os06g44210 LOC_Os10g39540 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5148a osa-miR5148b osa-miR5148c |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g40279.1 |
| Rice Genome Annotation | LOC_Os12g40279.1 |
| Ricechip | LOC_Os12g40279.1 |
| KEGG | osa:4352687 osa:4352686 dosa:Os12t0594300-00dosa:Os12t0594200-00 |
| Entrez-Gene | 4352687 |