RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41090.1 View Network Show in Genome Browser |
| Other Names | Os12g0603700 |
| Description | CAMK_KIN1/SNF1/Nim1_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25444742-25446274 Nucleotide Length: 1320 |
| Protein-coding | LOC_Os12g41090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g40510 LOC_Os03g42840 LOC_Os02g05630 LOC_Os04g37904 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os02g55560 LOC_Os06g33530 LOC_Os04g56450 LOC_Os10g39540 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41090.1 |
| Rice Genome Annotation | LOC_Os12g41090.1 |
| Ricechip | LOC_Os12g41090.1 |
| KEGG | osa:4352728 dosa:Os12t0603700-00 |
| Entrez-Gene | 4352728 |