RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41190.1 View Network Show in Genome Browser |
| Other Names | Os12g0604800 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25528303-25532732 Nucleotide Length: 975 |
| Protein-coding | LOC_Os12g41190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g36710 LOC_Os11g01420 LOC_Os03g08450 LOC_Os05g30530 LOC_Os01g41880 LOC_Os03g61019 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os07g06710 LOC_Os03g22140 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41190.1 |
| Rice Genome Annotation | LOC_Os12g41190.1 |
| Ricechip | LOC_Os12g41190.1 |
| KEGG | osa:4352735 dosa:Os12t0604800-01 |
| Entrez-Gene | 4352735 |