RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41230.1 View Network Show in Genome Browser |
| Other Names | Os12g0605500 |
| Description | tesmin/TSO1-like CXC domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25561750-25569052 Nucleotide Length: 2283 |
| Protein-coding | LOC_Os12g41230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g37510 LOC_Os08g40170 LOC_Os02g47150 LOC_Os10g42230 LOC_Os03g49610 LOC_Os09g38710 LOC_Os03g12140 LOC_Os03g22040 LOC_Os03g02290 LOC_Os03g38010 LOC_Os10g09870 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41230.1 |
| Rice Genome Annotation | LOC_Os12g41230.1 |
| Ricechip | LOC_Os12g41230.1 |
| KEGG | osa:4352740 dosa:Os12t0605500-01 |
| Entrez-Gene | 4352740 |