RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41250.1 View Network Show in Genome Browser |
| Other Names | Os12g0605800 |
| Description | methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25576455-25582064 Nucleotide Length: 2214 |
| Protein-coding | LOC_Os12g41250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g32850 LOC_Os02g46990 LOC_Os05g03480 LOC_Os01g50030 LOC_Os12g04020 LOC_Os11g04210 LOC_Os03g54790 LOC_Os05g47540 LOC_Os01g21610 LOC_Os07g15880 LOC_Os02g58340 More.. |
| Downstream Genes | LOC_Os12g43630 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 |
| Metacyc Pathways | LEU-DEG2-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41250.1 |
| Rice Genome Annotation | LOC_Os12g41250.1 |
| Ricechip | LOC_Os12g41250.1 |
| KEGG | osa:4352741 dosa:Os12t0605800-01 |
| Entrez-Gene | 4352741 |