RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41390.1 View Network Show in Genome Browser |
| Other Names | Os12g0607000 |
| Description | homocysteine S-methyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25641843-25645443 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os12g41390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38520 LOC_Os01g62350 LOC_Os03g60090 LOC_Os04g42000 LOC_Os06g30370 LOC_Os04g28180 LOC_Os06g03740 LOC_Os07g44860 LOC_Os02g28810 LOC_Os09g33780 LOC_Os06g48230 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 rn01110 |
| Metacyc Pathways | PWY-702 PWY-5441 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41390.1 |
| Rice Genome Annotation | LOC_Os12g41390.1 |
| Ricechip | LOC_Os12g41390.1 |
| KEGG | osa:4352747 dosa:Os12t0607000-02 |
| Entrez-Gene | 4352747 |