RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41400.1 View Network Show in Genome Browser |
| Other Names | Os12g0607100 |
| Description | eukaryotic translation initiation factor 2 subunit gamma, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25647427-25652252 Nucleotide Length: 1395 |
| Protein-coding | LOC_Os12g41400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g51630 LOC_Os08g13690 LOC_Os05g30530 LOC_Os03g18510 LOC_Os03g44310 LOC_Os12g31380 LOC_Os03g21550 LOC_Os07g42632 LOC_Os02g01560 LOC_Os01g25610 LOC_Os02g56740 More.. |
| Downstream Genes | LOC_Os12g42260 LOC_Os12g43370 LOC_Os12g42370 LOC_Os12g42180 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41400.1 |
| Rice Genome Annotation | LOC_Os12g41400.1 |
| Ricechip | LOC_Os12g41400.1 |
| KEGG | osa:4352748 dosa:Os12t0607100-01 |
| Entrez-Gene | 4352748 |