RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41500.1 View Network Show in Genome Browser |
| Other Names | Os12g0608600 |
| Description | rhodanese-like domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25701322-25706990 Nucleotide Length: 1227 |
| Protein-coding | LOC_Os12g41500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42470 LOC_Os03g03130 LOC_Os10g39120 LOC_Os09g36040 LOC_Os09g10750 LOC_Os05g25780 LOC_Os04g17660 LOC_Os03g18020 LOC_Os03g01770 LOC_Os02g38240 LOC_Os02g01220 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 |
| Metacyc Pathways | PWY-5329 PWY-5350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41500.1 |
| Rice Genome Annotation | LOC_Os12g41500.1 |
| Ricechip | LOC_Os12g41500.1 |
| KEGG | osa:4352752 dosa:Os12t0608600-01 |
| Entrez-Gene | 4352752 |