RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41590.1 View Network Show in Genome Browser |
| Other Names | Os12g0609500 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25738001-25741105 Nucleotide Length: 840 |
| Protein-coding | LOC_Os12g41590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g11280 LOC_Os06g11240 LOC_Os06g11210 LOC_Os04g27060 LOC_Os04g26910 LOC_Os04g52400 LOC_Os06g11290 LOC_Os04g40730 LOC_Os02g05680 LOC_Os06g11200 LOC_Os04g26870 More.. |
| Downstream Genes | LOC_Os12g43740 |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41590.1 |
| Rice Genome Annotation | LOC_Os12g41590.1 |
| Ricechip | LOC_Os12g41590.1 |
| KEGG | osa:4352758 dosa:Os12t0609500-01 |
| Entrez-Gene | 4352758 |