RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41830.1 View Network Show in Genome Browser |
| Other Names | Os12g0612500 |
| Description | Methyltransferase small domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25911188-25914643 Nucleotide Length: 1062 |
| Protein-coding | LOC_Os12g41830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g19630 LOC_Os11g43600 LOC_Os01g66379 LOC_Os06g06730 LOC_Os02g35060 LOC_Os10g35840 LOC_Os03g53890 LOC_Os04g51400 LOC_Os02g50990 LOC_Os04g01480 LOC_Os01g37560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396c-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41830.1 |
| Rice Genome Annotation | LOC_Os12g41830.1 |
| Ricechip | LOC_Os12g41830.1 |
| KEGG | osa:4352776 dosa:Os12t0612500-01 |
| Entrez-Gene | 4352776 |