RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41900.1 View Network Show in Genome Browser |
| Other Names | Os12g0613200 |
| Description | SET domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25967436-25976050 Nucleotide Length: 3639 |
| Protein-coding | LOC_Os12g41900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g02890 LOC_Os12g13460 LOC_Os08g14660 LOC_Os08g10470 LOC_Os07g28840 LOC_Os06g03676 LOC_Os05g50980 LOC_Os04g53700 LOC_Os02g50100 LOC_Os01g74500 LOC_Os03g07260 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41900.1 |
| Rice Genome Annotation | LOC_Os12g41900.1 |
| Ricechip | LOC_Os12g41900.1 |
| KEGG | osa:4352779 dosa:Os12t0613200-02 |
| Entrez-Gene | 4352779 |