RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41930.1 View Network Show in Genome Browser |
| Other Names | Os12g0613500 |
| Description | SRP40, C-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 25990064-25993360 Nucleotide Length: 1347 |
| Protein-coding | LOC_Os12g41930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g47780 LOC_Os01g21940 LOC_Os04g59460 LOC_Os07g22220 LOC_Os02g56880 LOC_Os03g14980 LOC_Os01g15020 LOC_Os03g13220 LOC_Os04g36890 LOC_Os07g40930 LOC_Os09g02700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41930.1 |
| Rice Genome Annotation | LOC_Os12g41930.1 |
| Ricechip | LOC_Os12g41930.1 |
| KEGG | osa:4352781 dosa:Os12t0613500-01 |
| Entrez-Gene | 4352781 |