RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g41950.1 View Network Show in Genome Browser |
| Other Names | Os12g0613700 |
| Description | auxin response factor, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26002359-26008415 Nucleotide Length: 2700 |
| Protein-coding | LOC_Os12g41950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61590 LOC_Os08g31460 LOC_Os05g39240 LOC_Os01g61550 LOC_Os07g25730 LOC_Os01g61510 LOC_Os01g65000 LOC_Os09g35790 LOC_Os08g43334 LOC_Os03g62200 LOC_Os02g34580 More.. |
| Reference | |
|---|---|
| PubMed | 21973088 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g41950.1 |
| Rice Genome Annotation | LOC_Os12g41950.1 |
| Ricechip | LOC_Os12g41950.1 |
| KEGG | osa:4352783 dosa:Os12t0613700-01 |
| Entrez-Gene | 4352783 |