RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g42090.2 View Network Show in Genome Browser |
| Other Names | Os12g0615400 |
| Description | methyltransferase domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26100839-26103558 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os12g42090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32880 LOC_Os01g46070 LOC_Os07g11110 LOC_Os02g35090 LOC_Os03g16050 LOC_Os07g37180 LOC_Os03g10060 LOC_Os07g27480 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2905 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g42090.2 |
| Rice Genome Annotation | LOC_Os12g42090.2 |
| Ricechip | LOC_Os12g42090.2 |
| KEGG | osa:4352791 dosa:Os12t0615400-01 |
| Entrez-Gene | 4352791 |