RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g42110.1 View Network Show in Genome Browser |
| Other Names | Os12g0615500 |
| Description | phosphonate metabolism protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26109881-26115852 Nucleotide Length: 855 |
| Protein-coding | LOC_Os12g42110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g42100 LOC_Os04g48820 LOC_Os07g06440 LOC_Os03g11120 LOC_Os07g06410 LOC_Os03g51790 LOC_Os11g38020 LOC_Os05g05710 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g42110.1 |
| Rice Genome Annotation | LOC_Os12g42110.1 |
| Ricechip | LOC_Os12g42110.1 |
| KEGG | osa:4352792 dosa:Os12t0615500-01 |
| Entrez-Gene | 4352792 |