RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g42130.1 View Network Show in Genome Browser |
| Other Names | Os12g0615700 |
| Description | MATE efflux family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26120373-26122925 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os12g42130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g08840 LOC_Os12g42120 LOC_Os12g01580 LOC_Os10g13940 LOC_Os09g37610 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os12g02330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g42130.1 |
| Rice Genome Annotation | LOC_Os12g42130.1 |
| Ricechip | LOC_Os12g42130.1 |
| KEGG | osa:4352793 dosa:Os12t0615700-01 |
| Entrez-Gene | 4352793 |