RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g42210.1 View Network Show in Genome Browser |
| Other Names | Os12g0616600 |
| Description | OsDegp15 - Putative Deg protease homologue, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26180159-26184989 Nucleotide Length: 942 |
| Protein-coding | LOC_Os12g42210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g31470 LOC_Os03g10060 LOC_Os03g20640 LOC_Os09g36130 LOC_Os04g50110 LOC_Os10g39400 LOC_Os03g55640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g42210.1 |
| Rice Genome Annotation | LOC_Os12g42210.1 |
| Ricechip | LOC_Os12g42210.1 |
| KEGG | osa:4352801 dosa:Os12t0616600-01 |
| Entrez-Gene | 4352801 |