RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g42260.1 View Network Show in Genome Browser |
| Other Names | Os12g0617100 |
| Description | initiation factor 2 subunit family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26213958-26221808 Nucleotide Length: 1824 |
| Protein-coding | LOC_Os12g42260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os12g31380 LOC_Os02g56740 LOC_Os10g25320 LOC_Os12g41400 LOC_Os12g07740 LOC_Os03g18510 LOC_Os03g21550 LOC_Os07g48300 LOC_Os07g49220 LOC_Os03g40400 LOC_Os12g42250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g42260.1 |
| Rice Genome Annotation | LOC_Os12g42260.1 |
| Ricechip | LOC_Os12g42260.1 |
| KEGG | osa:4352805 dosa:Os12t0617100-01 |
| Entrez-Gene | 4352805 |