RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g43100.1 View Network Show in Genome Browser |
| Other Names | Os12g0626100 |
| Description | deoxyhypusine hydroxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 26759582-26762370 Nucleotide Length: 909 |
| Protein-coding | LOC_Os12g43100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g46150 LOC_Os03g18410 LOC_Os03g60930 LOC_Os02g43020 LOC_Os07g47710 LOC_Os03g58720 LOC_Os03g22340 LOC_Os09g19560 LOC_Os10g31520 LOC_Os10g10434 LOC_Os12g36950 More.. |
| Downstream Genes | LOC_Os12g43830 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g43100.1 |
| Rice Genome Annotation | LOC_Os12g43100.1 |
| Ricechip | LOC_Os12g43100.1 |
| KEGG | osa:4352843 dosa:Os12t0626100-01 |
| Entrez-Gene | 4352843 |