RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g43664.1 View Network Show in Genome Browser |
| Other Names | Os12g0633000 |
| Description | FGGY family of carbohydrate kinases, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 27128006-27131959 Nucleotide Length: 1713 |
| Protein-coding | LOC_Os12g43664 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g47290 LOC_Os04g48820 LOC_Os02g08130 LOC_Os04g01600 LOC_Os04g55410 LOC_Os09g02810 LOC_Os08g05830 LOC_Os01g04870 LOC_Os11g29400 LOC_Os06g02144 LOC_Os01g03090 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn01100 |
| Metacyc Pathways | XYLCAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g43664.1 |
| Rice Genome Annotation | LOC_Os12g43664.1 |
| Ricechip | LOC_Os12g43664.1 |
| KEGG | osa:4352874 dosa:Os12t0633000-01 |
| Entrez-Gene | 4352874 |