RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g44000.2 View Network Show in Genome Browser |
| Other Names | Os12g0636800 |
| Description | ubiquitin-conjugating enzyme E2 W, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 27295430-27298738 Nucleotide Length: 408 |
| Protein-coding | LOC_Os12g44000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g06890 LOC_Os06g45120 LOC_Os09g12570 LOC_Os01g03520 LOC_Os12g41220 LOC_Os04g58800 LOC_Os03g50440 LOC_Os01g67560 LOC_Os05g48390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g44000.2 |
| Rice Genome Annotation | LOC_Os12g44000.2 |
| Ricechip | LOC_Os12g44000.2 |
| KEGG | osa:4352894 dosa:Os12t0636800-01 |
| Entrez-Gene | 4352894 |