RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g44210.1 View Network Show in Genome Browser |
| Other Names | Os12g0639400 |
| Description | ATPase, AAA family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 27422434-27423998 Nucleotide Length: 1224 |
| Protein-coding | LOC_Os12g44210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08950 LOC_Os03g05730 LOC_Os07g08170 LOC_Os10g30580 LOC_Os01g62040 LOC_Os02g21970 LOC_Os07g42632 LOC_Os07g49150 LOC_Os03g18690 LOC_Os01g66330 LOC_Os12g07720 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR413 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g44210.1 |
| Rice Genome Annotation | LOC_Os12g44210.1 |
| Ricechip | LOC_Os12g44210.1 |
| KEGG | osa:4352916 dosa:Os12t0639400-01 |
| Entrez-Gene | 4352916 |