RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g44350.1 View Network Show in Genome Browser |
| Other Names | |
| Description | actin, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 27491864-27493254 Nucleotide Length: 1134 |
| Protein-coding | LOC_Os12g44350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g09860 LOC_Os08g28190 LOC_Os07g08170 LOC_Os06g08770 LOC_Os03g22900 LOC_Os01g62040 LOC_Os01g46580 LOC_Os04g04020 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g44350.1 |
| Rice Genome Annotation | LOC_Os12g44350.1 |
| Ricechip | LOC_Os12g44350.1 |