RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g44360.1 View Network Show in Genome Browser |
| Other Names | Os12g0641100 |
| Description | sodium/hydrogen exchanger 7, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 27494401-27508516 Nucleotide Length: 3447 |
| Protein-coding | LOC_Os12g44360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g42710 LOC_Os06g40370 LOC_Os03g63770 LOC_Os09g11450 LOC_Os06g36590 LOC_Os09g30446 LOC_Os03g03590 |
| Reference | |
|---|---|
| PubMed | 17142477 23082824 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g44360.1 |
| Rice Genome Annotation | LOC_Os12g44360.1 |
| Ricechip | LOC_Os12g44360.1 |
| KEGG | osa:4352928 dosa:Os12t0641100-02 |
| Entrez-Gene | 4352928 |