RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os02g16640 View Network |
| Names | Os02g0266100 protein (Putative u1 small nuclear ribonucleoprotein C) (cDNA clone:006-201-G11, full insert sequence) (cDNA clone:J033043C12, full insert sequence) |
| Function | Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates E complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region (By similarity). |
| Attributes | Length: 229 Status: Complete Existence: Evidence at transcript level Molecular Weight: 23883.3 pI: 9.288 Subcellular Location (adjusted): Cytosol Nucleus |
| Gene Model | LOC_Os02g16640.1 |
| Protein-Protein Interaction ( Show in Viewer ) |
|---|
| LOC_Os07g47500 LOC_Os12g35360 |
| Database Links | |
|---|---|
| UniprotKB | Q6ETX3 |
| Ensembl | LOC_Os02g16640.1 |
| Refseq | NP_001046503.1 |
| EMBL | AP004683 AP008208 AK060957 AK073513 CM000139 |
| KEGG | osa:4328958 dosa:Os02t0266100-02 |