RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os06g33980 View Network |
| Names | Probable tRNA-splicing endonuclease subunit Sen2 (tRNA-intron endonuclease Sen2) |
| Function | Constitutes one of the two catalytic subunit of the tRNA-splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural features of the tRNA body. Probably carries the active site for 5'-splice site cleavage (By similarity). |
| Attributes | Length: 294 Status: Complete Existence: Evidence at transcript level Molecular Weight: 32736.6 pI: 7.2228 Subcellular Location (adjusted): Nucleus |
| Gene Model | LOC_Os06g33980.1 LOC_Os06g33980.2 |
| Enzyme | 3.1.27.9 tRNA-intron endonuclease |
| Database Links | |
|---|---|
| UniprotKB | Q5Z6B1 |
| Ensembl | LOC_Os06g33980.1 LOC_Os06g33980.2 |
| Refseq | NP_001057781.1 |
| EMBL | AP004749 AP005450 |
| KEGG | osa:4341203 dosa:Os06t0530700-01 |