RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os09g25320 View Network |
| Names | Ubiquitin-NEDD8-like protein RUB1 [Cleaved into: Ubiquitin; NEDD8-like protein RUB1 (OsRUB1) (Ubiquitin-related protein 1)] |
| Function | Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).; NEDD8-like protein RUB1: Appears to function as a stable post-translational protein modifier. |
| Attributes | Length: 154 Status: Complete Existence: Evidence at transcript level Molecular Weight: 17129.7 pI: 5.8485 Subcellular Location (adjusted): Cytosol |
| Gene Model | LOC_Os09g25320.1 |
| Protein-Protein Interaction ( Show in Viewer ) |
|---|
| LOC_Os10g02500 LOC_Os01g27150 |
| Database Links | |
|---|---|
| UniprotKB | P0C030 |
| Refseq | NP_001063199.1 |
| EMBL | AP005426 AP005579 |
| KEGG | osa:4347085 dosa:Os09t0420800-01 |