Dataset

Datasets used in downstream fine-tuning tasks:

• miRNA-mRNA interaction prediction: miTarRAW, DeepMiTarLeft (IndTest)
• RNA secondary structure prediction: RNAStrAlign, ArchiveII, bpRNA-1m
• mRNA/lncRNA classification: lncRNA_H, lncRNA_M

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Model

Model weight files generated in experiments:

• Weight files from both the pre-training phase and downstream tasks
• Experiments with k=1, 3, 5
• ssp/all_1mer.pth is the weight file trained on more datasets and used by the web server

Download 937MB