C3'2009 2009年“芯片、计算机、作物”暑期学校
2009 International Summer School on Chips, Computers and Crops September 18th to 27th, 2009 Zhejiang University, Hangzhou, China
08:30~09:00Introduction: Ming Chen & Andrew Harrison
An overview of what needs to be done at the school, and the expected work load on each day.
Session 1 (Lectures)
09:00~10:15Lecture 1
Introduction to transcriptomics, Affymetrix technology.
Lecturer: Sean May, Nottingham University, UK
10:30~11:45Lecture 2
Databases and information systems for biology.
Lecturer: Matthias Lange, IPK, Germany
12:00~13:30Lunch
Session 2 (Practical)
13:30~17:00Practice 1
GeneSpring.
Lecturer: Neil Graham, Nottingham University, UK ; Xuming Wang, China
17:30~18:00Dinner
Tuesday, 22th September 2009
Session 3 (Lectures)
09:00~10:15Lecture 3
Analysis of biological networks.
Lecturer: Hendrik Mehlhorn, IPK, Germany
10:30~11:45Lecture 4
Introduction to bioinformatics resources.
Lecturer: Ralf Hofestädt, University of Bielefeld, Germany
12:00~13:30Lunch
Session 4 (Lectures)
14:00~14:45Lecture 5
CELLmicrocosmos 4.1: A Software Approach for the Localization of Metabolic Pathways in a Virtual Cell Environment
Lecturer: Bjoern Sommer, University of Bielefeld, Germany
15:00~17:00
Poster session
17:30~18:00Dinner
Wednesday, 23th September 2009
Session 5 (Lectures)
09:00~10:15Lecture 6
Gene networks.
Lecturer: Hugh Shanahan, University of London, UK
10:30~11:45Lecture 7
Detail description of Affymetrix technology.
Lecturer: Andrew Harrison, Essex University, UK
12:00~13:30Lunch
Session 6 (Practical)
13:30~17:00Practice 2
Tricks with Affymetrix analysis for cross-species analysis.
Lecturer: Sean May, Nottingham University, UK
17:30~18:00Dinner
Thursday, 24th September 2009
Session 7 (Lectures)
09:30~11:40Lecture 8
Introduction to plant sciences.
Lecturer: Chuanzao Mao, Zhejiang University, China
12:00~13:30Lunch
Session 8 (Lectures)
13:30~17:00Practice 3
R/Bioconductor.
Lecturer: Hugh Shanahan, University of London, UK ; Junjie Cao, Zhejiang University, China
17:30~18:00Dinner
Friday, 25th September 2009
Session 9 (Lectures)
09:00~10:15Lecture 9
Building gene networks from large datasets.
Lecturer: Chris Needham, the University of Leeds, UK
10:30~11:45Lecture 10
Research problems facing analysts.
(Open discussion)
12:00~13:30Lunch
Session 10 (Practical)
13:30~17:00Practice 4
Groups work together on data analysis (with lecturers available to help).
17:30~18:00Dinner
Saturday, 26th September 2009
Session 11 (Lectures)
09:30~11:40Lecture 11
Modelling gene networks using Petri-nets.
Lecturer: Ming Chen, Zhejiang University, China
12:00~13:30Lunch
Session 12 (Practical)
13:30~17:00Practice 5
Each group gives presentation on biology they have discovered, prizes awarded, general discussion on biology.
17:30~18:00Dinner
Sunday, 27th September 2009
Session 13
09:30~11:40Open session
Science in the UK and China, and moving between countries; career structures in both countries. We expect to recruit UK students who may be considering spending part of their careers in China and we hope some of the Chinese students similarly look to spend part of their careers in UK. The RCUK-China relevant organisations are included.