A variety of format files are provided below.
Species | CircRNA | Sequence | Interaction data |
Arabidopsis thaliana | ath.gtf, ath.csv | ath_isoform.fasta | ath-circ-miRNA, ath-miRNA-mRNA |
Brachypodium distachyon | bdi.gtf, bdi.csv | bdi_isoform.fasta | bdi-circ-miRNA, bdi-miRNA-mRNA |
Glycine max | gma.gtf, gma.csv | gma_isoform.fasta | gma-circ-miRNA, gma-miRNA-mRNA |
Hordeum vulgare | hvu.gtf, hvu.csv | hvu_isoform.fasta | hvu-circ-miRNA, hvu-miRNA-mRNA |
Oryza sativa | osa.gtf, osa.csv | osa_isoform.fasta | osa-circ-miRNA, osa-miRNA-mRNA |
Solanum lycopersicum | sly.gtf, sly.csv | sly_isoform.fasta | sly-circ-miRNA, sly-miRNA-mRNA |
Triticum aestivum | tae.gtf, tae.csv | tae_isoform.fasta | tae-circ-miRNA, tae-miRNA-mRNA |
Zea mays | zma.gtf, zma.csv | zma_isoform.fasta | zma-circ-miRNA, zma-miRNA-mRNA |
All | circ.gtf, circ.csv | circ_isoform.fasta | circ-miRNA, miRNA-mRNA |