RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39770.3 View Network Show in Genome Browser |
| Other Names | Os01g0579600 |
| Description | calcineurin B, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22427835-22430870 Nucleotide Length: 657 |
| Protein-coding | LOC_Os01g39770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16240 LOC_Os01g17190 LOC_Os01g33080 LOC_Os01g16930 |
| Downstream Genes | LOC_Os01g59360 LOC_Os05g26890 LOC_Os05g41270 LOC_Os11g04170 LOC_Os12g03970 LOC_Os01g43410 LOC_Os05g50810 LOC_Os07g33110 LOC_Os10g23090 LOC_Os04g47300 LOC_Os05g39090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39770.3 |
| Rice Genome Annotation | LOC_Os01g39770.3 |
| Ricechip | LOC_Os01g39770.3 |
| KEGG | osa:9269084 dosa:Os01t0579600-01 |
| Entrez-Gene | 9269084 |