RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g60660.1 View Network Show in Genome Browser |
| Other Names | Os01g0821800 |
| Description | methionyl-tRNA synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 35069246-35074491 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os01g60660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52170 LOC_Os01g37837 |
| Downstream Genes | LOC_Os03g42880 LOC_Os05g31000 LOC_Os02g38900 LOC_Os07g06440 LOC_Os04g40880 LOC_Os07g06410 LOC_Os04g48820 LOC_Os07g03160 LOC_Os02g03050 LOC_Os03g10340 LOC_Os04g53770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g60660.1 |
| Rice Genome Annotation | LOC_Os01g60660.1 |
| Ricechip | LOC_Os01g60660.1 |
| KEGG | osa:4327613 dosa:Os01t0821800-01 |
| Entrez-Gene | 4327613 |