RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g39890.1 View Network Show in Genome Browser |
| Other Names | Os02g0612300 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 24100078-24103493 Nucleotide Length: 732 |
| Protein-coding | LOC_Os02g39890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12850 LOC_Os02g39300 LOC_Os02g37430 LOC_Os01g34614 LOC_Os02g14780 LOC_Os01g14950 LOC_Os02g04480 LOC_Os01g72890 LOC_Os02g01740 LOC_Os02g01250 LOC_Os01g49680 More.. |
| Downstream Genes | LOC_Os03g22570 LOC_Os05g06350 LOC_Os07g36940 LOC_Os05g24970 LOC_Os10g02630 LOC_Os04g39444 LOC_Os05g28510 LOC_Os07g47630 LOC_Os07g33330 LOC_Os02g58090 LOC_Os05g23720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g39890.1 |
| Rice Genome Annotation | LOC_Os02g39890.1 |
| Ricechip | LOC_Os02g39890.1 |
| KEGG | osa:4329963 dosa:Os02t0612300-01 |
| Entrez-Gene | 4329963 |