RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g13970.2 View Network Show in Genome Browser
Other Names	Os03g0243300
Description	26S proteasome non-ATPase regulatory subunit 4, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 7579448-7583747 Nucleotide Length: 1209
Protein-coding	LOC_Os03g13970

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0004872	receptor activity	Molecular Function	IEA
GO:0004871	signal transducer activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g21970 LOC_Os01g16190 LOC_Os02g54340 LOC_Os02g05340 LOC_Os01g32800 LOC_Os03g11570 LOC_Os02g11050 LOC_Os02g38810 LOC_Os02g10640 LOC_Os02g56000 LOC_Os01g36930 More..
Downstream Genes	LOC_Os05g30800 LOC_Os06g09290 LOC_Os04g36700 LOC_Os08g43640 LOC_Os07g25420 LOC_Os04g40850 LOC_Os03g63430 LOC_Os09g37000 LOC_Os07g49150 LOC_Os06g48640 LOC_Os09g15750 More..

Database Links
Gramene	LOC_Os03g13970.2
Rice Genome Annotation	LOC_Os03g13970.2
Ricechip	LOC_Os03g13970.2
KEGG	osa:4332222 dosa:Os03t0243300-01
Entrez-Gene	4332222