RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57760.1 View Network Show in Genome Browser |
| Other Names | Os03g0791500 |
| Description | 25.3 kDa vesicle transport protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32911203-32915131 Nucleotide Length: 657 |
| Protein-coding | LOC_Os03g57760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64650 LOC_Os03g42320 LOC_Os03g06960 LOC_Os03g12590 LOC_Os01g73300 LOC_Os01g23620 LOC_Os01g37800 LOC_Os02g03450 LOC_Os01g07730 LOC_Os02g11830 LOC_Os03g55240 More.. |
| Downstream Genes | LOC_Os07g10150 LOC_Os03g58840 LOC_Os07g09600 LOC_Os12g05810 LOC_Os04g52460 LOC_Os04g44810 LOC_Os08g01880 LOC_Os08g25624 LOC_Os05g15160 LOC_Os05g07870 LOC_Os04g58090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57760.1 |
| Rice Genome Annotation | LOC_Os03g57760.1 |
| Ricechip | LOC_Os03g57760.1 |
| KEGG | osa:4334384 dosa:Os03t0791500-01 |
| Entrez-Gene | 4334384 |