RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g40940.1 View Network Show in Genome Browser |
| Other Names | Os04g0486500 |
| Description | mitotic spindle checkpoint protein MAD2, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 24301441-24303182 Nucleotide Length: 624 |
| Protein-coding | LOC_Os04g40940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10570 LOC_Os02g03060 LOC_Os01g65580 LOC_Os02g10020 LOC_Os01g16650 LOC_Os03g13970 LOC_Os03g08280 LOC_Os01g59120 LOC_Os02g47150 LOC_Os03g63430 LOC_Os02g42320 More.. |
| Downstream Genes | LOC_Os07g32480 LOC_Os04g47580 LOC_Os06g41750 LOC_Os12g39210 LOC_Os12g31810 LOC_Os08g36490 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os06g48640 LOC_Os09g33986 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g40940.1 |
| Rice Genome Annotation | LOC_Os04g40940.1 |
| Ricechip | LOC_Os04g40940.1 |
| KEGG | osa:4336215 dosa:Os04t0486500-01 |
| Entrez-Gene | 4336215 |