RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g43050.4 View Network Show in Genome Browser
Other Names	Os04g0509300
Description	Dicer, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 25474093-25480962 Nucleotide Length: 2880
Protein-coding	LOC_Os04g43050

Gene Ontology Classification
GO	Name	Type	Code
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0040029	regulation of gene expression, epigenetic	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0004518	nuclease activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003723	RNA binding	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g55640 LOC_Os02g16709 LOC_Os01g56520 LOC_Os02g04080 LOC_Os02g04050 LOC_Os01g67740 LOC_Os02g04040 LOC_Os02g04170 LOC_Os02g04060 LOC_Os03g39860 LOC_Os03g22950 More..
Downstream Genes	LOC_Os08g10649 LOC_Os09g28000 LOC_Os05g49220 LOC_Os11g40500 LOC_Os12g44390 LOC_Os06g05250 LOC_Os05g41750 LOC_Os07g12150 LOC_Os08g43580 LOC_Os12g34890 LOC_Os09g36860 More..

Reference
PubMed	18826656 21973320 17804793

Database Links
Gramene	LOC_Os04g43050.4
Rice Genome Annotation	LOC_Os04g43050.4
Ricechip	LOC_Os04g43050.4
KEGG	osa:4336362 dosa:Os04t0509300-01
Entrez-Gene	4336362