RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os04g43050 View Network |
| Names | Endoribonuclease Dicer homolog 4 (Dicer-like protein 4) (OsDCL4) (Protein SHOOT ORGANIZATION 1) |
| Function | Involved in the RNA silencing pathway. Cleaves double-stranded RNA to produce small interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs. Required for the production of 21 nucleotide siRNAs. Regulates shoot apical meristem (SAM) initiation and maintenance, leaf polarization and lemma polarity through the trans-acting siRNAS (ta-siRNAs) pathway, which probably modulate the expression of the ARF2, ARF3, ARF4, ARF14 and ARF15 genes. Can process endogenous 21 nucleotide siRNAs derived from an imperfect inverted repeat. May not be involved in microRNAs (miRNAs) production. |
| Attributes | Length: 1592 Status: Complete Existence: Evidence at transcript level Molecular Weight: 180010 pI: 7.5347 Subcellular Location (adjusted): Nucleus |
| Gene Model | LOC_Os04g43050.1 LOC_Os04g43050.4 |
| Enzyme | 3.1.26.- Endoribonucleases producing 5'-phosphomonoesters |
| Reference | |
|---|---|
| PubMed | 18826656 21973320 17804793 |
| Database Links | |
|---|---|
| UniprotKB | A7LFZ6 |
| Refseq | NP_001053278.1 |
| EMBL | EU009924 AB353922 AL606607 AP008210 AK066586 |
| KEGG | osa:4336362 dosa:Os04t0509300-01 |