RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g45930.2 View Network Show in Genome Browser |
| Other Names | Os04g0543200 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27200262-27206973 Nucleotide Length: 2325 |
| Protein-coding | LOC_Os04g45930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15310 LOC_Os02g52140 LOC_Os02g11750 LOC_Os01g72834 LOC_Os01g26940 LOC_Os02g40900 LOC_Os01g72890 LOC_Os03g17010 LOC_Os03g04780 LOC_Os04g37690 LOC_Os02g16860 More.. |
| Downstream Genes | LOC_Os05g13650 LOC_Os08g45240 LOC_Os06g41790 LOC_Os06g11620 LOC_Os12g43600 LOC_Os05g13620 LOC_Os06g20010 LOC_Os05g01540 LOC_Os08g09350 LOC_Os11g01020 LOC_Os09g29980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g45930.2 |
| Rice Genome Annotation | LOC_Os04g45930.2 |
| Ricechip | LOC_Os04g45930.2 |
| KEGG | osa:4336550 dosa:Os04t0543200-01 |
| Entrez-Gene | 4336550 |