RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g02510.1 View Network Show in Genome Browser |
| Other Names | Os06g0115500 |
| Description | ribosomal protein L13, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 867364-869824 Nucleotide Length: 627 |
| Protein-coding | LOC_Os06g02510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54870 LOC_Os03g08440 LOC_Os04g52361 LOC_Os05g49030 LOC_Os04g42380 LOC_Os01g47660 LOC_Os03g40180 LOC_Os03g22180 LOC_Os05g19370 LOC_Os03g10340 LOC_Os05g40820 More.. |
| Downstream Genes | LOC_Os07g01870 LOC_Os07g10660 LOC_Os08g10608 LOC_Os07g47780 LOC_Os07g12250 LOC_Os12g21798 LOC_Os09g31180 LOC_Os11g38959 LOC_Os10g32820 LOC_Os07g42450 LOC_Os06g35730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g02510.1 |
| Rice Genome Annotation | LOC_Os06g02510.1 |
| Ricechip | LOC_Os06g02510.1 |
| KEGG | osa:4339923 dosa:Os06t0115500-01 |
| Entrez-Gene | 4339923 |