RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g38470.3 View Network Show in Genome Browser
Other Names	Os06g0583400
Description	histone deacetylase 19, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 22796510-22800221 Nucleotide Length: 1380
Protein-coding	LOC_Os06g38470

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g01130 LOC_Os03g43890 LOC_Os02g56130 LOC_Os05g01020 LOC_Os05g05780 LOC_Os02g37000 LOC_Os02g51880 LOC_Os02g02960 LOC_Os03g22450 LOC_Os01g01960 LOC_Os05g51550 More..
Downstream Genes	LOC_Os08g25200 LOC_Os11g34300 LOC_Os07g06980 LOC_Os12g07720 LOC_Os11g32900 LOC_Os07g38360 LOC_Os08g04270 LOC_Os08g42600 LOC_Os07g08500 LOC_Os11g36390 LOC_Os07g43360 More..

Reference
PubMed	19453457

Database Links
Gramene	LOC_Os06g38470.3
Rice Genome Annotation	LOC_Os06g38470.3
Ricechip	LOC_Os06g38470.3
KEGG	osa:4341387 dosa:Os06t0583400-01
Entrez-Gene	4341387