RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g48350.1 View Network Show in Genome Browser |
| Other Names | Os06g0698674 |
| Description | CPuORF14 - conserved peptide uORF-containing transcript, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29234804-29238557 Nucleotide Length: 1353 |
| Protein-coding | LOC_Os06g48350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os05g16660 LOC_Os05g38520 LOC_Os01g62350 LOC_Os03g21550 LOC_Os02g54700 LOC_Os02g27760 LOC_Os03g18510 LOC_Os02g01332 LOC_Os04g50990 LOC_Os02g47140 More.. |
| Downstream Genes | LOC_Os08g21660 LOC_Os10g41960 LOC_Os07g03230 LOC_Os12g41400 LOC_Os12g07740 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os08g02410 LOC_Os07g33860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g48350.1 |
| Rice Genome Annotation | LOC_Os06g48350.1 |
| Ricechip | LOC_Os06g48350.1 |
| KEGG | osa:9272123 dosa:Os06t0698674-01 |
| Entrez-Gene | 9272123 |