RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g25440.1 View Network Show in Genome Browser |
| Other Names | Os07g0435400 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 14534478-14541920 Nucleotide Length: 2037 |
| Protein-coding | LOC_Os07g25440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g53770 LOC_Os01g27730 LOC_Os03g58810 LOC_Os03g49210 LOC_Os01g43020 LOC_Os06g43690 LOC_Os03g60930 LOC_Os03g57280 LOC_Os02g37870 LOC_Os03g21530 LOC_Os07g10350 More.. |
| Downstream Genes | LOC_Os12g07300 LOC_Os08g23730 LOC_Os12g36950 LOC_Os09g18320 LOC_Os07g40930 LOC_Os12g29660 LOC_Os11g01420 LOC_Os12g01430 LOC_Os09g37860 LOC_Os07g29320 LOC_Os10g35280 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5832 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g25440.1 |
| Rice Genome Annotation | LOC_Os07g25440.1 |
| Ricechip | LOC_Os07g25440.1 |
| KEGG | osa:4343071 dosa:Os07t0435400-01 |
| Entrez-Gene | 4343071 |