RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g34570.1 View Network Show in Genome Browser |
| Other Names | Os07g0529600 |
| Description | FAD dependent oxidoreductase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 20724563-20726098 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os07g34570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18320 LOC_Os02g21460 LOC_Os07g04240 LOC_Os07g06080 LOC_Os04g14790 LOC_Os07g12250 LOC_Os02g14059 LOC_Os01g59990 LOC_Os06g35730 LOC_Os05g11710 LOC_Os01g10820 More.. |
| Downstream Genes | LOC_Os11g06750 LOC_Os12g07010 LOC_Os10g37210 LOC_Os08g09350 LOC_Os12g38000 LOC_Os09g37620 LOC_Os12g42980 LOC_Os10g41410 LOC_Os12g38110 LOC_Os08g03640 LOC_Os07g48780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Reference | |
|---|---|
| PubMed | 16514565 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g34570.1 |
| Rice Genome Annotation | LOC_Os07g34570.1 |
| Ricechip | LOC_Os07g34570.1 |
| KEGG | osa:4343443 dosa:Os07t0529600-01 |
| Entrez-Gene | 4343443 |