RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g02810.1 View Network Show in Genome Browser |
| Other Names | Os09g0116400 |
| Description | CCAAT/enhancer-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 1298966-1312563 Nucleotide Length: 3015 |
| Protein-coding | LOC_Os09g02810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g10350 LOC_Os06g30320 LOC_Os03g58810 LOC_Os05g08360 LOC_Os02g37870 LOC_Os02g49270 LOC_Os02g57590 LOC_Os05g48422 LOC_Os03g49210 LOC_Os03g61560 LOC_Os01g67134 More.. |
| Downstream Genes | LOC_Os10g35280 LOC_Os09g37860 LOC_Os11g06750 LOC_Os12g07010 LOC_Os12g29660 LOC_Os10g18220 LOC_Os12g07300 LOC_Os11g01420 LOC_Os12g01430 LOC_Os10g41470 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g02810.1 |
| Rice Genome Annotation | LOC_Os09g02810.1 |
| Ricechip | LOC_Os09g02810.1 |
| KEGG | osa:4346414 dosa:Os09t0116400-01 |
| Entrez-Gene | 4346414 |