RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g28200.1 View Network Show in Genome Browser |
| Other Names | Os10g0417600 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 14640026-14643350 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os10g28200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04620 LOC_Os04g30550 |
| Downstream Genes | LOC_Os11g11780 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00053 rn00520 rn01110 rn01100 |
| Metacyc Pathways | PWY-2582 PWY-882 PWY4FS-12 PWY4FS-13 PWY-5115 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g28200.1 |
| Rice Genome Annotation | LOC_Os10g28200.1 |
| Ricechip | LOC_Os10g28200.1 |
| KEGG | osa:4348636 dosa:Os10t0417600-01 |
| Entrez-Gene | 4348636 |