RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40780.1 View Network Show in Genome Browser |
| Other Names | Os10g0556801,Os10g0556600,Os10g0556700 |
| Description | CCR4-Not complex component, Not1domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21884416-21903586 Nucleotide Length: 7221 |
| Protein-coding | LOC_Os10g40780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55300 LOC_Os03g07080 LOC_Os10g27230 LOC_Os07g37790 LOC_Os04g52340 LOC_Os03g52594 LOC_Os02g54120 LOC_Os09g24990 LOC_Os03g57130 LOC_Os08g34170 LOC_Os01g63940 More.. |
| Downstream Genes | LOC_Os12g01190 LOC_Os12g39070 LOC_Os10g42950 LOC_Os12g13950 LOC_Os11g11390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40780.1 |
| Rice Genome Annotation | LOC_Os10g40780.1 |
| Ricechip | LOC_Os10g40780.1 |
| KEGG | osa:9272729 osa:9268359 osa:9271006 dosa:Os10t0556600-00dosa:Os10t0556700-00 |
| Entrez-Gene | 92727299271006 |